EGAF00005318814 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318814
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2934315
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	10705	0.364821091123482	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10477	0.35705096419436905	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7031	0.23961299315172366	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4052	0.13809015051212975	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3852	0.1312742496971184	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3034	0.10339721536372204	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	2975	0.10138652462329369	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	3245	36.47724	32
GCGGCAC	3385	34.97157	33
TCGCCGG	3325	34.150887	48
CGGCACC	3485	34.071186	34
CCCGTCG	3325	34.012314	44
CCGTCGC	3320	33.96745	45
CGTTGGA	545	32.485764	33
TTCGTTG	535	32.43523	31
ACCCGCG	3830	31.59833	25
CCCCCGA	3825	31.437395	19
GCACCCC	3995	30.252926	36
GATTTCG	415	30.090212	28
CCCCGAC	4240	28.444542	20
AACGGGA	465	28.401417	40
GATAGGC	3170	28.066616	40
GGCACCC	4240	28.009531	35
AGTCCGC	4405	27.923143	7
CACCCCC	4380	27.52006	37
CAGTCCG	4335	27.25506	6
AAACGGG	590	27.092916	39