EGAF00005318820 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318820
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3049082
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	11280	0.36994741368057665	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10360	0.3397743976711679	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	7120	0.233512906507598	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	4445	0.14578158278458894	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	3799	0.12459487806493888	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3190	0.10462165333697158	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	3146	0.10317859604956509	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	3104	0.1018011322752225	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	3320	38.382206	32
GCGGCAC	3455	37.08834	33
TCGTTGG	640	36.891888	32
CGTTGGA	650	36.3291	33
CGGCACC	3530	36.204945	34
TTCGTTG	695	35.464172	31
CCGTCGC	3400	34.918633	45
TCGCCGG	3410	34.636585	48
GATTTCG	535	34.376926	28
CCCGTCG	3440	34.198822	44
ACCCGCG	4000	32.2589	25
AAACGGG	670	32.17133	39
CCCCCGA	3990	32.143177	19
GCACCCC	4060	31.916882	36
GATAGGC	3155	30.747808	40
GGCACCC	4300	30.289585	35
AACGGGA	600	30.134321	40
CCCCGAC	4345	29.680426	20
ATTTCGT	635	29.512623	29
GAAACGG	745	29.392002	38