EGAF00005318831 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318831
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3194179
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11551	0.36162657133491893	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8324	0.2605990459520271	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7891	0.2470431369062285	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7213	0.22581702528255304	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4955	0.1551259337688965	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4358	0.13643568503831502	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3354	0.10500350794366879	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3235	0.10127798097727148	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	2325	61.960003	7
TCTACGG	2340	61.708786	5
GTCTACG	2365	60.911102	4
CTACGGC	2415	59.934727	6
ACGGCCA	2685	54.036667	8
GCCATAC	2740	52.571434	11
CGGCCAT	2815	51.174778	9
GGGTCTA	2060	50.56716	2
CCGAACT	770	49.417694	67
GGCCATA	2935	49.199596	10
CCATACC	2935	49.19806	12
GCGCGGT	3935	49.01607	9
GCCGGTT	765	48.984447	3
GAACGCG	2930	48.799362	24
CCTGGTT	4255	48.523037	70
CATACCA	3010	48.315605	13
GCGTCTA	520	48.262817	2
TGAACGC	2975	48.161137	23
ATCTCGT	3010	47.269512	35
CCCGATC	3055	46.825233	31