EGAF00005318833 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318833
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3179932
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11693	0.36771226554530095	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8274	0.26019424314733774	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7585	0.2385271131583946	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7267	0.22852689931734388	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4805	0.15110386008254265	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4509	0.14179548493489796	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3231	0.10160594629067539	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2500	61.585377	4
TACGGCC	2580	59.939327	7
TCTACGG	2565	59.890747	5
CTACGGC	2645	58.078396	6
GCCATAC	2900	53.443836	11
ACGGCCA	2950	53.236958	8
CGGCCAT	2960	52.708805	9
GCGTCTA	570	51.872147	2
CCATACC	3025	51.235413	12
GCGCGGT	4255	50.881516	9
GGCCATA	3130	50.175407	10
CCTGGTT	4385	50.071556	70
GGGTCTA	2240	49.882248	2
CATACCA	3120	49.785503	13
GAACGCG	3090	49.708042	24
ATCTCGT	3145	48.97894	35
TGGCGCG	4465	48.334507	15
TGAACGC	3215	47.86664	23
CCCGATC	3235	47.522827	31
TACCACC	3355	46.195866	15