EGAF00005318835 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318835
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3187343
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11776	0.3694613350367375	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8427	0.26438949306679577	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7737	0.24274136796698692	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7149	0.2242934004906281	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4799	0.15056427877388784	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4474	0.1403676981109344	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3402	0.10673466897036182	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3190	0.10008336096868142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2505	62.035015	4
TCTACGG	2515	61.788353	5
TACGGCC	2560	60.83557	7
CTACGGC	2680	57.9824	6
CGGCCAT	2860	54.334007	9
GCCATAC	2875	53.573044	11
ACGGCCA	2915	53.54472	8
CCATACC	2980	51.800777	12
GCGCGGT	4035	51.292316	9
GGGTCTA	2275	50.626324	2
CCTGGTT	4440	50.10444	70
CATACCA	3090	49.95673	13
GAACGCG	3120	49.142162	24
TACCACC	3160	48.958126	15
TGAACGC	3160	48.505596	23
ATCTCGT	3200	48.470165	35
TGGCGCG	4310	47.93984	15
GGCCATA	3255	47.8461	10
CCCGATC	3240	47.570744	31
CCGAACT	765	47.347115	67