EGAF00005318849 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318849
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3201088
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	63

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12513	0.3908983445628486	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	11550	0.3608148229601935	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11277	0.3522864725993162	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9632	0.3008976947837735	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5675	0.17728347361896954	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5437	0.16984850150948677	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4691	0.14654392506547773	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4214	0.13164274146790092	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	3760	0.11746006357838336	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3524	0.11008757022612312	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2165	61.888245	4
TCTACGG	2170	61.428185	5
TACGGCC	2225	60.062656	7
CTACGGC	2305	57.828625	6
GCCATAC	2405	55.279163	11
CGGCCAT	2435	54.880997	9
GGCCATA	2485	53.776752	10
ACGGCCA	2500	53.72963	8
CATACCA	2510	53.10391	13
CCATACC	2505	53.07241	12
CCGAACT	805	52.8393	67
GGGTCTA	1910	51.22672	2
CGGTTCA	835	51.150707	5
GCGCGGT	5440	50.966667	9
GCCGGTT	865	48.580296	3
CGCGGTG	5775	48.12944	10
TACCACC	2845	46.971966	15
GCGTCTA	485	46.88282	2
CCTGGTT	3745	46.8485	70
TGGCGCG	5930	46.813335	15