EGAF00005318863 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318863
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3020319
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13199	0.4370068194783399	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11594	0.38386673725523696	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9665	0.31999931133102166	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8261	0.27351415529286804	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4594	0.15210313877441423	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4589	0.1519375933469279	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3851	0.12750308824994977	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3379	0.11187559989524284	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3185	0.10545243730877435	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	3125	0.10346589217893871	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2705	61.235973	5
TACGGCC	2705	60.724667	7
GTCTACG	2785	59.600864	4
CTACGGC	2840	58.32511	6
ACGGCCA	2905	56.78155	8
GCCATAC	2965	55.173374	11
GCGTCTA	595	54.53473	2
GGGTCTA	2400	53.21729	2
CCATACC	3105	53.13205	12
GGCCATA	3125	52.678066	10
CGGCCAT	3145	52.559055	9
CCTGGTT	4445	51.693447	70
CATACCA	3185	51.689125	13
GCGCGGT	4750	51.146004	9
CCGAACT	795	50.647163	67
GCCGGTT	820	50.089302	3
GAACGCG	3390	48.529953	24
ATCTCGT	3410	48.26896	35
TACCACC	3440	48.258846	15
CGCGGTG	5060	48.083946	10