EGAF00005318865 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318865
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3016305
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13452	0.4459761197889471	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	11870	0.39352784284082676	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10262	0.34021758409709896	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8520	0.28246480379139377	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4768	0.15807420005602882	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4612	0.15290230928238357	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3747	0.12422483800544043	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3457	0.11461042566981788	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	3296	0.10927276916624812	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3181	0.10546015737798399	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	2790	62.40918	7
TCTACGG	2850	61.216515	5
GTCTACG	2855	60.988304	4
CTACGGC	2900	60.161064	6
ACGGCCA	3030	57.46587	8
CGGCCAT	3050	57.08905	9
GCCATAC	3045	56.94926	11
GGGTCTA	2215	56.6237	2
CCATACC	3070	56.485504	12
CATACCA	3210	54.021965	13
GGCCATA	3235	53.923927	10
CCTGGTT	4615	51.939144	70
TACCACC	3390	50.851215	15
TGAACGC	3420	50.762936	23
GCGCGGT	4950	50.7401	9
GAACGCG	3425	50.69725	24
GCGTCTA	670	50.02214	2
CTGAACG	3485	50.0063	22
CCGAACT	740	49.973454	67
CCCGATC	3485	49.802933	31