EGAF00005318867 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318867
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3100037
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13432	0.43328515111271254	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12055	0.38886632643416835	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10290	0.3319315221076394	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8432	0.2719967535871346	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4678	0.1509014247249307	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4597	0.14828855268501634	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3915	0.1262888152625275	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3541	0.11422444312761428	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	3363	0.1084825761757037	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3136	0.10116008292804247	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2845	61.861446	4
TCTACGG	2845	61.741142	5
TACGGCC	2875	60.86468	7
CTACGGC	2930	59.951958	6
GGGTCTA	2215	57.9592	2
ACGGCCA	3110	56.376556	8
CGGCCAT	3140	55.50818	9
GCCATAC	3175	55.222397	11
CCATACC	3275	53.42997	12
CCTGGTT	4645	52.811226	70
CATACCA	3380	51.76933	13
GGCCATA	3405	51.39089	10
GCGCGGT	4715	50.87429	9
GAACGCG	3500	49.465015	24
CCCGATC	3550	49.349968	31
ATCTCGT	3535	49.12854	35
TGAACGC	3545	49.0186	23
CGTCTAC	770	48.85038	3
GCGTCTA	615	48.81995	2
TACCACC	3580	48.77448	15