EGAF00005318873 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318873
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3511906
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	34422	0.9801515188618375	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	16792	0.47814491617941934	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16115	0.4588676348398847	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14631	0.41661137855056485	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9373	0.266892109299053	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7667	0.21831449930607483	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6715	0.1912067122525489	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5629	0.16028333332384181	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4635	0.13197961448854267	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4337	0.1234941937511995	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3767	0.10726369099856316	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3589	0.10219521820914342	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3539	0.10077148989750864	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	6930	64.3047	4
TCTACGG	7000	63.71067	5
TACGGCC	7010	63.424038	7
CTACGGC	7075	62.889828	6
CCTGGTT	10365	61.25007	70
ACGGCCA	7415	60.144936	8
GGGTCTA	5270	59.644363	2
GCCATAC	7480	59.207825	11
CGGCCAT	7560	59.08212	9
GCGTCTA	1375	58.397964	2
CCATACC	7580	58.200436	12
CATACCA	7720	57.233856	13
GGCCATA	7815	57.064873	10
TACCACC	7935	55.46852	15
CGTCTAC	1680	55.135803	3
GCGCGGT	8100	54.042137	9
ATACCAC	8225	53.84493	14
CGCGGTG	8355	52.4323	10
CGGTCTA	995	52.42097	2
ACCACCC	8380	52.400185	16