EGAF00005318875 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318875
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3601419
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	34783	0.9658137528568601	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17310	0.4806438795374823	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16426	0.4560979991497796	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14624	0.40606216605177015	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9471	0.262979675511236	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7798	0.216525763872518	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6666	0.18509370889641	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5796	0.16093656417095595	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4754	0.13200352416644662	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4380	0.12161872861780315	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3793	0.10531959763637612	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3694	0.10257068116761754	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3669	0.10187651034217346	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	7195	63.00138	4
TCTACGG	7220	62.783234	5
TACGGCC	7235	62.232265	7
CTACGGC	7350	61.581978	6
CCTGGTT	10760	60.295925	70
ACGGCCA	7610	59.165634	8
GGGTCTA	5770	58.817226	2
CGGCCAT	7625	58.689186	9
GCGTCTA	1260	58.28104	2
GCCATAC	7750	57.6975	11
CCATACC	7810	57.386063	12
CGTCTAC	1465	57.151047	3
CATACCA	7935	56.567772	13
GGCCATA	8035	55.822598	10
GCGCGGT	7995	54.771236	9
TACCACC	8275	54.030922	15
ATACCAC	8370	53.623394	14
CGGTCTA	885	53.50815	2
GCCGGTT	1250	52.980896	3
CGCGGTG	8365	52.26655	10