EGAF00005318877 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318877
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3568819
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	34308	0.9613264219900197	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17580	0.4925999329189853	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16293	0.45653758288105956	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14584	0.40865059281515814	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9168	0.2568917056314708	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7841	0.21970853663354742	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6611	0.1852433536136184	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	5630	0.15775526861967504	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4811	0.1348065004137223	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4464	0.12508339593574233	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3811	0.10678602641378003	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3685	0.1032554466897873	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	6620	64.28493	4
TCTACGG	6640	63.938034	5
TACGGCC	6745	62.993587	7
CTACGGC	6780	62.617783	6
CCTGGTT	9975	60.87482	70
ACGGCCA	7010	60.75911	8
CGGCCAT	7075	59.61711	9
GGGTCTA	5295	59.04701	2
GCCATAC	7075	58.986496	11
GGCCATA	7335	57.691048	10
CCATACC	7295	57.395782	12
CATACCA	7330	57.215366	13
CGTCTAC	1425	56.356815	3
GCGTCTA	1285	56.086926	2
TACCACC	7545	55.26657	15
ATACCAC	7750	54.114662	14
GCGCGGT	7915	54.027218	9
CGGTTCA	1320	53.56128	5
GCCGGTT	1295	53.268658	3
CTGAACG	7945	53.044865	22