EGAF00005318885 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318885
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3271642
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12403	0.3791062714074462	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9455	0.2889986129289207	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9382	0.2867673174509925	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7687	0.23495847039498818	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4419	0.13506979064335278	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3617	0.11055610607762097	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3292	0.10062225634711866	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2095	60.58797	4
TCTACGG	2140	59.0006	5
TACGGCC	2185	57.78283	7
CTACGGC	2275	55.347828	6
GCCATAC	2375	52.872143	11
CGGCCAT	2435	51.994358	9
GCGCGGT	4510	51.096252	9
ACGGCCA	2505	50.5391	8
CCATACC	2575	49.030506	12
GGCCATA	2635	48.178837	10
GGGTCTA	2015	48.110554	2
CATACCA	2615	47.884777	13
TGAACGC	2640	47.360847	23
GAACGCG	2660	47.01484	24
ATCTCGT	2690	46.791134	35
CGCGGTG	4990	46.73425	10
CCGAACT	710	46.575558	67
TGGCGCG	4970	46.57098	15
CTGAACG	2730	46.03983	22
GCGTCTA	480	45.280205	2