EGAF00005318887 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318887
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3318303
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	18876	0.5688449788943325	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16425	0.4949819229889495	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14616	0.44046610571728984	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13811	0.41620671771082984	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8520	0.2567577463540852	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4430	0.13350197374983538	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3929	0.11840389500295784	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3929	0.11840389500295784	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3859	0.11629438300239611	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3757	0.11322052265872043	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3321	0.10008127648379306	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2835	61.394157	5
GTCTACG	2835	61.272343	4
TACGGCC	2885	60.210438	7
CTACGGC	2975	58.505016	6
GCGTCTA	675	55.76552	2
GCGCGGT	7740	55.013805	9
GCCATAC	3220	53.938984	11
ACGGCCA	3255	53.57843	8
CGGCCAT	3265	53.308556	9
CCGAACT	1360	53.256756	67
GCCGGTT	1375	52.99352	3
GGGTCTA	2415	52.908764	2
CGCGGTG	8095	52.55856	10
CCATACC	3345	52.03283	12
TGGCGCG	8185	51.89547	15
GGCCATA	3380	51.59698	10
CGAACTT	1435	51.349133	68
CCTGGTT	5035	50.43465	70
CATACCA	3500	49.62985	13
CGTCTAC	860	49.39121	3