EGAF00005318893 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318893
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3310996
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17853	0.5392033092157164	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	15888	0.47985560840303043	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	14368	0.4339479721509781	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	13714	0.41419560760568724	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8126	0.24542463959485303	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4205	0.12700105949992088	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3792	0.11452747149196194	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	3774	0.11398382843108236	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3634	0.1097554935131302	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3550	0.10721849256235888	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2775	62.06476	4
TCTACGG	2780	61.83739	5
TACGGCC	2840	60.53005	7
CTACGGC	2925	58.65393	6
ACGGCCA	3085	56.17054	8
CGGCCAT	3160	54.947445	9
GCGCGGT	7820	54.428066	9
GCCATAC	3165	54.205425	11
CCGAACT	1270	53.721153	67
CGGTTCA	1310	52.965294	5
CGCGGTG	8120	52.501415	10
GCCGGTT	1310	52.431137	3
TGGCGCG	8270	51.66968	15
GGCCATA	3385	51.498283	10
GGGTCTA	2580	51.250515	2
CCATACC	3350	51.20734	12
CATACCA	3375	50.725754	13
CCGGTTC	1410	48.9574	4
CGAACTT	1450	48.86328	68
TACCACC	3505	48.351967	15