EGAF00005318912 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318912
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3670086
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	18090	0.49290398099663063	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10907	0.29718649644722217	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	9145	0.24917672228934146	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	8155	0.22220187755818255	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	5253	0.14313016098260367	No Hit
GCTGCCGGGGGGGCTGTAACACTCGGGGGGGGTTTCGGTCCCGCCGCCGC	4762	0.12975172788866526	No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA	4648	0.12664553364689546	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4573	0.12460198480362586	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4433	0.12078736029618924	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4423	0.12051488711708662	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3705	0.10095131285751888	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGGCA	5455	38.3929	32
GCGGCAC	5615	37.3096	33
CGGCACC	5710	36.63865	34
TGGCCGT	1275	35.09012	70
GCACCCC	6110	34.31467	36
GGCACCC	6380	33.234238	35
CCCCCGA	6440	32.65478	19
TCGCCGG	5640	32.569794	48
CCGTCGC	5620	32.454567	45
CACCCCC	6450	32.406628	37
CCCGTCG	5720	31.877113	44
ACCCGCG	6490	31.096714	25
GTGCCGT	560	30.527952	1
AGGACCG	690	30.258871	70
TACGGGT	975	30.143614	6
CCCCGAC	6995	29.971113	20
CGTACGT	245	28.235338	19
GGCGATC	1505	28.075983	70
GTACGGG	1040	27.927174	5
CATTAGC	3245	27.812649	13