EGAF00005318922 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318922
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3296236
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	17682	0.5364300371696687	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14334	0.43485963990442433	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	13310	0.40379390310645236	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8834	0.26800265514969196	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	6363	0.19303836254442946	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	5510	0.16716036109065005	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5362	0.16267039131906816	No Hit
TGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTCAGG	5079	0.1540848410125974	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4706	0.14276890368286735	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4266	0.1294203449024888	No Hit
GTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCCTGCACTGGTGGGGTGAATTCTTTGCC	4172	0.12656860734486244	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	4104	0.1245056482606221	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4024	0.12207863757328055	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	3706	0.11243127009109785	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3593	0.1090031174952279	No Hit
GCACTGGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACC	3456	0.10484686169315545	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1360	0.0	40.558952	70
ACGATCG	45	9.9642115E-5	38.369514	6
CGCGGCA	4435	0.0	37.339043	32
GCGGCAC	4665	0.0	35.582123	33
CGGCACC	4760	0.0	34.878883	34
GTTCCGT	300	0.0	34.664658	1
CCCGTCG	4590	0.0	33.431618	44
CCGTCGC	4585	0.0	33.25159	45
TCGCCGG	4660	0.0	32.99302	48
GCACCCC	5225	0.0	31.927446	36
TCAGGAT	2480	0.0	31.921398	70
CCCCCGA	5360	0.0	31.584774	19
ACCCGCG	5255	0.0	31.258633	25
TTATCGG	145	0.0	30.960232	7
CACCCCC	5490	0.0	30.713898	37
GACGTAT	250	0.0	30.62063	44
AGGACCG	735	0.0	30.575052	70
CCCCGAC	5645	0.0	30.179264	20
ATGGCCG	1395	0.0	30.087751	69
GGCACCC	5565	0.0	29.903996	35