EGAF00005318923 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318923
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3296236
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	12760	0.38710820463097906	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	12410	0.37649003287385974	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11954	0.36265607195601285	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10450	0.3170282710339915	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5143	0.15602644956247064	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	4747	0.14401274666012992	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3382	0.10260187680736452	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2565	60.035835	4
TACGGCC	2580	59.820614	7
TCTACGG	2620	58.643757	5
CTACGGC	2715	56.716354	6
ACGGCCA	2870	53.655716	8
GCGCGGT	5315	53.26889	9
CGGCCAT	2940	52.143322	9
GCCATAC	2980	51.328327	11
GGGTCTA	2365	51.099865	2
CCGAACT	815	51.04234	67
GCGTCTA	490	50.031685	2
CCTGGTT	4370	49.796333	70
CGCGGTG	5710	49.64438	10
TGGCGCG	5790	49.016594	15
CCATACC	3130	48.868504	12
CATACCA	3195	48.30658	13
GGCCATA	3210	47.972565	10
TGAACGC	3265	46.89632	23
ATCTCGT	3275	46.25206	35
GAACGCG	3325	45.745174	24