EGAF00005318924 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318924
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3299237
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	17522	0.5310924919913301	No Hit
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14265	0.43237269708117365	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	13425	0.4069122648660888	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8709	0.2639701240013979	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	6417	0.19449951610023772	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5533	0.167705442197696	No Hit
TGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTCAGG	5315	0.16109785383711447	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	5308	0.1608856835686554	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	4579	0.1387896656105639	No Hit
GTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCCTGCACTGGTGGGGTGAATTCTTTGCC	4361	0.13218207724998235	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4282	0.12978758422023032	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	4022	0.12190697424889453	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3994	0.12105829317505835	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3763	0.11405667431591002	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	3660	0.11093474036572698	No Hit
GCACTGGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACC	3609	0.10938892840981111	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	1515	41.151066	70
CGCGGCA	4505	39.52046	32
GCGGCAC	4670	38.05922	33
AGGACCG	580	37.885612	70
CGGCACC	4725	37.55717	34
GCACCCC	5185	34.451443	36
TCAGGAT	2450	34.20674	70
CCCGTCG	4630	33.81218	44
TCGCCGG	4620	33.722355	48
CCGTCGC	4655	33.345924	45
CCCCCGA	5390	33.319687	19
ATGGCCG	1465	33.23275	69
GGCACCC	5415	32.90953	35
ACCCGCG	5310	32.876488	25
CACCCCC	5500	32.430573	37
TCGCCGT	375	31.584005	1
CCCCGAC	5710	31.334742	20
CCCCCGT	5070	30.779058	42
GGTAGAC	1125	29.525328	70
AGTCCGC	6130	29.507994	7