EGAF00005318927 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318927
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3060112
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8228	0.26887904756427217	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6501	0.21244320469316155	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3766	0.1230673909974537	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3548	0.11594346873578483	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4085	49.24957	9
TGGCGCG	4225	47.534893	15
CCGAACT	715	45.865437	67
CGCGGTG	4615	43.66864	10
CGGTATT	225	43.309856	1
CTACTCG	4960	40.546413	37
CGAACTT	835	40.465145	68
TACTCGG	5005	40.121674	38
GCCGGTT	830	39.632336	3
CGTGCCT	5170	39.19584	20
GTAGTCC	5245	38.80236	27
CGGCATA	200	38.282818	1
CGGTATA	200	38.282818	1
TAGTCCC	5330	38.256752	28
GCGTGCC	5375	37.82487	19
TGTAGTC	5395	37.78098	26
ACTCGGG	5395	37.681984	39
CGGTTCA	905	36.7317	5
CCTGTAG	5615	36.663906	24
CGGTAAG	200	36.54269	1