EGAF00005318933 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318933
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3050911
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8109	0.26578946419610405	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6266	0.20538127791993932	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3726	0.12212745635647845	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3504	0.11485094124345153	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	4035	49.174763	9
CGAACTT	735	47.465267	68
TGGCGCG	4290	46.730732	15
CCGAACT	760	42.708828	67
CGCGGTG	4750	42.137177	10
CTACTCG	4965	40.214108	37
TACTCGG	4965	40.084126	38
TAGTCCC	5185	38.650867	28
CGGTTCA	835	38.56868	5
CGTGCCT	5200	38.370724	20
GTAGTCC	5265	38.1238	27
ACTCGGG	5295	38.119503	39
GCCGGTT	830	37.541374	3
TGTAGTC	5460	37.20607	26
CGGGTAG	380	36.745026	1
GCGTGCC	5515	36.42497	19
CCTGTAG	5575	35.99445	24
AGGATCG	5445	35.576836	59
CGGCATA	265	35.56641	1
GTGGCGC	5790	34.92333	14