EGAF00005318941 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318941
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3349014
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	27217	0.8126869580121194	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16815	0.502088077266921	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	15770	0.47088486342547387	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14745	0.4402788402795569	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	10628	0.31734713560468847	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7555	0.2255887852364905	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7471	0.22308058431526412	No Hit
GGGGACTCTTCTGGTCCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5158	0.15401548037720952	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5146	0.15365716595989148	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3806	0.11364538935937563	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3433	0.1025077828877395	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3430	0.10241820428340997	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	5980	63.85097	5
GTCTACG	5985	63.84859	4
TACGGCC	6130	62.343918	7
CTACGGC	6175	61.77967	6
ACGGCCA	6455	59.204994	8
GGGTCTA	4665	58.649567	2
GCCATAC	6485	58.61709	11
CGGCCAT	6605	57.91183	9
CCTGGTT	9470	57.11045	70
CCATACC	6670	56.937828	12
GGCCATA	6800	56.201214	10
GCGTCTA	1100	56.16427	2
CATACCA	6750	56.162453	13
GCGCGGT	8540	54.368137	9
CCGAACT	1220	54.273243	67
TACCACC	7000	54.106544	15
CGTCTAC	1370	53.753872	3
CGGTCTA	830	53.167553	2
GCCGGTT	1170	52.790543	3
ATACCAC	7240	52.266083	14