EGAF00005318965 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318965
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3375780
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	14518	0.4300635704933379	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13493	0.39970021743123074	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	10674	0.3161935908145673	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	9401	0.27848378745060404	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5216	0.15451243860678124	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3837	0.11366262019444394	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3623	0.10732334453074548	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2115	60.913933	5
GTCTACG	2155	59.78061	4
TACGGCC	2225	57.750587	7
CTACGGC	2255	57.285385	6
CCGAACT	855	52.612827	67
GCGCGGT	6420	51.952557	9
ACGGCCA	2515	51.091476	8
GCCATAC	2505	50.749737	11
CGGCCAT	2540	50.587852	9
TGGCGCG	6815	49.390465	15
GCCGGTT	870	49.097237	3
GGGTCTA	2020	47.366676	2
CGCGGTG	7090	47.14018	10
CATACCA	2695	47.04223	13
CCATACC	2725	46.525715	12
GGCCATA	2855	45.007027	10
GAACGCG	2810	44.37985	24
TGAACGC	2845	44.165096	23
TACCACC	2860	44.089287	15
CGAACTT	1055	43.829395	68