EGAF00005318967 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318967
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5076844
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	21884	0.43105519885976407	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	17624	0.3471448009826577	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	16136	0.31783525355516146	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	15532	0.3059380985509895	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8415	0.16575258172203047	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6263	0.12336404270054388	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6016	0.11849881540579148	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5526	0.10884714992227455	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5304	0.10447435453994647	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	4670	62.236576	7
GTCTACG	4730	61.884453	4
TCTACGG	4735	61.74629	5
CTACGGC	4880	59.91162	6
GCCATAC	5205	55.50944	11
CGGCCAT	5280	55.17751	9
ACGGCCA	5360	54.289104	8
CCATACC	5480	52.913113	12
GCGCGGT	8970	52.77368	9
GGGTCTA	4145	52.6649	2
CATACCA	5670	51.018387	13
GGCCATA	5710	50.842644	10
CCTGGTT	8390	49.614822	70
TGAACGC	5825	49.51538	23
TGGCGCG	9615	49.413746	15
TACCACC	5890	49.346928	15
GAACGCG	5850	49.25349	24
CTGAACG	5985	49.040905	22
CCGAACT	1445	48.043358	67
CGCGGTG	9960	48.014153	10