EGAF00005318968 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318968
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5085381
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	25011	0.49182155673291733	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	13997	0.27523994760667886	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	12316	0.24218441056825438	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	11697	0.23001226456778756	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10289	0.2023250568639793	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	7821	0.15379378654224726	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	6959	0.1368432375076715	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	6896	0.13560439227660623	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6182	0.12156414632453301	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	6105	0.120050002153231	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	5690	0.11188935499621365	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	5499	0.10813349088298399	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	5380	0.1057934498909718	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	5345	0.10510520254037997	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2560	38.707733	70
CGCGGCA	7495	36.828724	32
GCGGCAC	7865	35.199883	33
TCGCCGG	7500	34.571934	48
CCCGTCG	7640	33.950657	44
CCGTCGC	7725	33.54802	45
CGGCACC	8265	33.42338	34
GCACCCC	8700	31.936844	36
ATGGCCG	2465	31.867079	69
CCCCCGA	8975	31.423008	19
AGGACCG	775	31.1538	70
CGTACGT	225	30.683693	19
CACCCCC	9065	30.66518	37
GGCACCC	9115	30.470716	35
ACCCGCG	9220	30.176792	25
GTTCCGT	545	29.782015	1
CCCCGAC	9815	28.598116	20
GTGCCGT	875	28.41693	1
TATCGGA	190	27.233456	8
AGTCCGC	10565	26.773762	7