EGAF00005318970 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318970
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5221769
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	25658	0.49136604855557575	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	14215	0.27222575337974547	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	12773	0.24461059077871888	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	11793	0.22584300454501147	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	10526	0.20157919662857549	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	8122	0.15554115856139938	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	7097	0.13591179540879728	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	6998	0.1340158861872289	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6355	0.12170205154613313	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	6225	0.11921247378043724	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	5902	0.11302683056259287	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	5766	0.11042234920771103	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	5638	0.10797107263841048	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	5453	0.10442821197184325	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2485	45.029457	70
CGCGGCA	8040	36.61846	32
GCGGCAC	8295	35.461926	33
CGGCACC	8455	34.643612	34
CCCGTCG	8105	34.578083	44
TCGCCGG	8155	34.450382	48
CCGTCGC	8355	33.564205	45
ATGGCCG	2655	33.385746	69
GCACCCC	9315	31.69256	36
CCCCCGA	9410	31.549612	19
CACCCCC	9660	30.46352	37
ACCCGCG	9910	30.03845	25
GGCACCC	9805	29.920301	35
CCCCGAC	10355	28.576126	20
TATGGCC	3050	27.137299	68
GTATGGC	3035	26.73009	67
AGTCCGC	11295	26.637064	7
GTTCCGT	585	26.578178	1
GATAGGC	4775	26.488358	40
CTTACCC	1740	26.361023	70