EGAF00005318971 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318971
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5221769
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	22176	0.4246836656313215	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	18427	0.3528880729882919	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	17414	0.3334885170140617	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	16574	0.3174020145280268	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	8734	0.16726132465836768	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6342	0.12145309376956352	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6208	0.11888691361107702	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5859	0.11220335484009346	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5776	0.11061385518968762	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	4625	61.60208	5
GTCTACG	4640	61.551018	4
TACGGCC	4665	61.012806	7
CTACGGC	4885	58.467384	6
ACGGCCA	5105	56.09201	8
CGGCCAT	5285	53.78992	9
GCGCGGT	9490	53.622177	9
GCCATAC	5460	52.57037	11
GGGTCTA	4045	52.52831	2
GGCCATA	5710	50.20875	10
CCATACC	5695	50.098198	12
CATACCA	5695	49.854927	13
CGCGGTG	10315	49.533653	10
TGGCGCG	10395	49.407055	15
CCTGGTT	8280	49.061825	70
GCCGGTT	1535	48.985424	3
GCGTCTA	1150	48.590164	2
CCGAACT	1570	48.04827	67
CGGTTCA	1575	47.742264	5
TGAACGC	6010	47.303585	23