EGAF00005318997 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318997
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5340155
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	17793	0.3331925758709251	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	16068	0.30089014270185044	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15965	0.2989613597358129	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11339	0.2123346606980509	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	11034	0.20662321599279423	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	7526	0.1409322388582354	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6914	0.1294718973512941	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	6384	0.11954709179789724	No Hit
GGGGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTC	5547	0.10387338944281581	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	7630	49.69686	9
CCGAACT	1325	48.37502	67
TGGCGCG	8050	46.932148	15
CGCGGTG	8525	44.439167	10
GCCGGTT	1430	44.153053	3
CGGTTCA	1400	43.630207	5
ACTCTTC	4765	43.57002	5
TCTGGTC	4775	42.68785	10
CTACTCG	9035	42.215782	37
GGACTCT	5450	41.996033	3
TACTCGG	9090	41.948475	38
GTAGTCC	9105	41.69542	27
TACGGCC	605	41.40634	7
TAGTCCC	9185	41.399963	28
CGTGCCT	9270	40.911453	20
TGTAGTC	9370	40.635494	26
GGGACTC	5430	40.254883	2
CGAACTT	1645	40.017323	68
GGGGACT	5635	39.99137	1
TCTACGG	620	39.85071	5