EGAF00005318999 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005318999
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3815137
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	28642	0.7507463034748163	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	27321	0.7161210724542788	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	16628	0.4358428019753943	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	13178	0.3454135460928402	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7622	0.19978312705415296	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6862	0.17986247938147437	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6470	0.1695876190029349	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5834	0.15291718226632492	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5329	0.13968043611540032	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4477	0.11734834161918693	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4204	0.11019263528413265	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4172	0.10935387117159882	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4171	0.10932765979308214	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4030	0.10563185542222993	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3395	64.02172	4
TCTACGG	3475	62.647278	5
TACGGCC	3480	62.45797	7
CTACGGC	3650	59.73831	6
ACGGCCA	3855	56.471924	8
GCCATAC	3830	55.928043	11
GGGTCTA	2880	55.547573	2
GCGCGGT	14535	54.229103	9
CGGCCAT	4015	53.964005	9
GCCGGTT	1960	53.94385	3
CGGTTCA	1985	53.61751	5
GGCCATA	4055	53.346462	10
CCGAACT	1990	53.126373	67
CATACCA	4085	52.359108	13
CCATACC	4090	52.210617	12
CGCGGTG	15170	52.07302	10
GCGTCTA	715	51.224346	2
CGAACTT	2090	51.174984	68
TGGCGCG	15430	50.877373	15
CCTGGTT	5965	50.86349	70