EGAF00005319001 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319001
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3791659
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	28623	0.754893834071049	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	27406	0.722797065875386	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	16904	0.44582068165940025	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	12970	0.3420666257171333	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7525	0.19846193974721885	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6920	0.18250586352833942	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6394	0.16863330800580958	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5766	0.15207063715381577	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5355	0.14123105479685805	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4527	0.11939364800473881	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4348	0.11467275933832656	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4178	0.11018923378921996	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4136	0.10908153924179362	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4059	0.10705076590484534	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3905	0.10298921923094877	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3750	62.278336	4
TACGGCC	3800	61.6399	7
TCTACGG	3790	61.529884	5
CTACGGC	3970	58.91416	6
GGGTCTA	2865	57.050735	2
ACGGCCA	4125	56.781174	8
GCCATAC	4140	55.82444	11
CGGTTCA	1790	55.39243	5
GCGCGGT	14055	54.614986	9
CCGAACT	1815	54.545845	67
CGGCCAT	4335	54.110218	9
CGAACTT	1915	53.810867	68
GCCGGTT	1870	53.761692	3
GGCCATA	4395	52.978497	10
CATACCA	4410	52.876633	13
CCATACC	4405	52.7798	12
CGCGGTG	14765	52.129112	10
CCTGGTT	6250	51.937225	70
TGGCGCG	15025	51.13508	15
CCGGTTC	1965	50.810894	4