EGAF00005319003 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319003
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3802574
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	28246	0.7428126316542426	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	27338	0.7189340693961511	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	17142	0.45079990553767	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	13080	0.3439775268015823	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7415	0.19499949244906215	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6751	0.17753763634843137	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6585	0.17317217232327367	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5630	0.1480576051905893	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5461	0.14361324723726612	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4713	0.12394236114800132	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4186	0.11008332776692842	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4113	0.10816357551490122	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4069	0.10700646456847389	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4056	0.10666459087975672	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3490	61.68015	4
TCTACGG	3515	61.14316	5
TACGGCC	3540	61.00337	7
CTACGGC	3720	58.050068	6
GGGTCTA	2955	55.074677	2
CCGAACT	2040	54.79722	67
ACGGCCA	3965	54.638832	8
GCGCGGT	13880	54.3925	9
GCCGGTT	2050	54.273838	3
GCCATAC	3930	54.070408	11
CATACCA	3990	53.8635	13
CGGCCAT	4005	53.834312	9
CGGTTCA	2095	52.61256	5
CGAACTT	2180	52.546303	68
CCATACC	4115	52.14334	12
CGCGGTG	14530	51.935474	10
GGCCATA	4210	51.04878	10
TGGCGCG	14785	50.96828	15
GCGTCTA	780	50.943848	2
CCGGTTC	2210	50.1875	4