EGAF00005319005 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319005
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3805489
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	27758	0.7294200561347043	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	26585	0.6985961593897656	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	16408	0.4311666647834221	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	12933	0.3398511991494391	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7106	0.18673027303455614	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	6719	0.1765607521135917	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	6450	0.16949201534940714	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	5461	0.14350323966249803	No Hit
GGCGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5163	0.13567244577503704	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4492	0.11804002061233129	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	4130	0.10852744548729479	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4000	0.10511132734846954	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	3988	0.10479599336642414	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3919	0.10298282296966305	No Hit
GCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	3818	0.10032876195411418	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3305	62.531982	4
TACGGCC	3330	61.758484	7
TCTACGG	3355	61.402924	5
CTACGGC	3485	59.31079	6
CGGTTCA	1975	58.27905	5
CCGAACT	1970	57.60324	67
ACGGCCA	3695	55.751392	8
GCCGGTT	2075	55.461662	3
GCCATAC	3735	55.247593	11
CGGCCAT	3755	55.045376	9
GCGCGGT	14280	54.82386	9
GGGTCTA	2745	54.027992	2
CGAACTT	2195	53.291794	68
CGCGGTG	14995	52.37107	10
GGCCATA	3980	52.2809	10
CATACCA	3970	51.9759	13
GCGTCTA	765	51.96851	2
CCGGTTC	2260	51.22817	4
TGGCGCG	15335	50.869156	15
CCATACC	4090	50.45093	12