EGAF00005319009 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319009
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3818723
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	22010	0.5763706872690164	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	19520	0.5111656435934211	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	17855	0.4675646806537159	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	17508	0.45847787336237794	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	9322	0.24411301893329262	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4937	0.12928405647647132	No Hit
CGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	4515	0.118233241845507	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	4441	0.116295421270409	No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	4009	0.10498273899416115	No Hit
GGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	3826	0.1001905610854728	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	3545	64.047356	4
TCTACGG	3600	63.164852	5
TACGGCC	3665	62.13645	7
CTACGGC	3735	61.064434	6
CCGAACT	1505	57.754185	67
GCGTCTA	800	57.040596	2
ACGGCCA	4045	56.298424	8
GCCGGTT	1560	55.38186	3
CGGCCAT	4110	55.323982	9
CGAACTT	1640	54.528717	68
CGGTTCA	1570	54.36876	5
GCCATAC	4240	53.87152	11
GGGTCTA	3025	53.826443	2
CCATACC	4250	53.82537	12
GCGCGGT	8830	53.654495	9
CGTCTAC	955	53.556286	3
GGCCATA	4350	52.668133	10
CATACCA	4345	52.64852	13
CCTGGTT	6015	52.298985	70
CGCGGTG	9305	50.952015	10