EGAF00005319015 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319015
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3168525
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8796	0.2776055104504462	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8197	0.25870081504801135	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7701	0.24304684356285652	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5441	0.171720279940982	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	3993	0.12602078254077212	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	3937	0.12425339866341595	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3397	0.10721076841748133	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	775	0.0	51.608402	67
GCGCGGT	3875	0.0	48.86136	9
TGGCGCG	4245	0.0	45.01224	15
GCCGGTT	890	0.0	44.710274	3
CGGTTCA	885	0.0	44.572445	5
TCGCGTA	40	4.2191798E-5	44.38963	60
CGAACTT	970	0.0	44.256805	68
TACGGCC	440	0.0	43.65495	7
TCTACGG	435	0.0	43.36959	5
CGCGGTG	4395	0.0	43.316452	10
GTCTACG	465	0.0	40.571552	4
GCCGAAC	1005	0.0	40.31958	66
GGCGATA	155	0.0	39.98319	1
GGGGACT	3130	0.0	39.489967	1
ACTCTTC	2665	0.0	38.484505	5
TCTGGTC	2640	0.0	38.45976	10
CTACTCG	4955	0.0	38.396847	37
TACTCGG	4935	0.0	38.220894	38
GTAGTCC	5070	0.0	37.64143	27
CTACGGC	505	0.0	37.357964	6