EGAF00005319017 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319017
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3169032
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	9197	0.2902148037634205	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	8354	0.26361362081544143	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	7747	0.24445950687780998	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	5658	0.1785403239853684	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4128	0.1302605969267587	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4031	0.1271997253419972	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	3787	0.11950021331434961	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCGGT	3855	0.0	48.56474	9
TGGCGCG	4085	0.0	45.828197	15
CCGAACT	745	0.0	45.496616	67
TCGCGTA	50	3.1357722E-6	42.646	60
CGCGGTG	4480	0.0	42.01648	10
CGGTTCA	775	0.0	41.589043	5
GTCTACG	410	0.0	40.979347	4
TCTGGTC	2385	0.0	39.390137	10
CTACTCG	4845	0.0	39.20009	37
TACGGCC	430	0.0	39.07333	7
GTAGTCC	4840	0.0	39.055584	27
ACTCTTC	2460	0.0	38.749176	5
TACTCGG	4925	0.0	38.731323	38
GCCGGTT	835	0.0	38.601223	3
TAGTCCC	4935	0.0	38.32993	28
TCTACGG	450	0.0	38.098713	5
TGTAGTC	4980	0.0	38.08382	26
GTTGATC	645	0.0	37.741917	10
CGGGTAT	275	0.0	37.5253	1
CGGCAAT	295	0.0	37.313293	1