EGAF00005319031 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319031
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4164255
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7944	0.19076641560135005	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7151	0.1717233935001579	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4612	0.11075210331740011	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1325	52.5685	4
TCTACGG	1335	52.174732	5
TACGGCC	1360	51.21687	7
GCGCGGT	4225	47.736675	9
CTACGGC	1535	45.150967	6
CGGGTAG	630	43.11137	1
ATCTCGT	1560	42.508858	35
TGGCGCG	4745	42.50219	15
GAACGCG	1595	41.52108	24
CGCGGTG	5000	40.822643	10
CCGAACT	695	40.025948	67
CCCGATC	1670	39.477688	31
GCCATAC	1760	38.977543	11
GCCCGAT	1705	38.662178	30
TGAACGC	1725	38.588787	23
CGTCTGA	1740	38.53876	39
CGGCAAA	840	37.722446	1
TCTCGGA	1785	37.423496	46
CTACTCG	5370	37.31802	37
GCCGGTT	790	37.283474	3