EGAF00005319035 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319035
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4158302
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	7793	0.1874082257613805	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	7383	0.1775484320282654	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4758	0.11442170385893087	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	1175	53.35664	4
TACGGCC	1170	52.696514	7
TCTACGG	1255	49.403423	5
GCGCGGT	4465	48.25215	9
CTACGGC	1370	45.505417	6
TGGCGCG	4820	44.766937	15
GAACGCG	1430	43.39305	24
CGGCATA	395	41.49192	1
CGCGGTG	5335	40.57825	10
GCCCGAT	1515	40.53792	30
ACGGCCA	1535	40.16607	8
ATCTCGT	1570	39.37108	35
CCCGATC	1580	38.876312	31
TGAACGC	1590	38.804226	23
CTACTCG	5620	38.263454	37
TACTCGG	5650	37.943268	38
CGTGCCT	5690	37.816723	20
CGTCTGA	1680	37.234013	39
CCGAACT	710	37.225002	67
CGGGTAG	615	36.855392	1