FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005319036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005319036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4163719
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG141250.33923999193989796No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG51900.12464818110924393No Hit
CGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTA43350.10411365416350142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)