EGAF00005319045 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319045
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3984486
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	18241	0.45780057954777603	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14242	0.35743631675453247	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12271	0.30796945954886024	No Hit
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	6955	0.17455199993173526	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6723	0.16872941704400518	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5421	0.13605268032062354	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	5365	0.13464722927875766	No Hit
GGGGACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGA	5255	0.13188652187509253	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	5005	0.12561218686676273	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGCC	1615	56.160988	7
GTCTACG	1675	54.13768	4
TCTACGG	1670	54.104076	5
GCGCGGT	6655	52.538692	9
GCCGGTT	1105	50.7418	3
GCCATAC	1760	50.55061	11
CTACGGC	1795	50.52924	6
CGAACTT	1185	49.586487	68
TGGCGCG	7225	48.77157	15
CCGAACT	1180	48.162674	67
CGGTTCA	1170	47.933052	5
CGCGGTG	7385	47.90781	10
CGGCCAT	1960	46.805378	9
CCATACC	1950	45.444206	12
CATACCA	1950	45.444206	13
GGGGACT	4730	45.443012	1
GCCGAAC	1255	45.139797	66
ACGGCCA	2040	44.96987	8
ACTCTTC	4945	44.874302	5
CTTAGGC	1285	44.456562	18