EGAF00005319049 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319049
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3583112
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	20382	0.5688351354911596	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9389	0.2620347898698115	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8734	0.2437545909812476	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6529	0.1822159061731813	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5838	0.16293099406326123	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5408	0.15093025280817346	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5002	0.13959932036732317	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4026	0.11236042858833327	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4013	0.11199761548062132	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4035	62.686134	4
TCTACGG	4080	61.994743	5
TACGGCC	4185	60.439323	7
CTACGGC	4260	59.778614	6
ACGGCCA	4460	57.0209	8
GGGTCTA	3220	56.360657	2
GCGTCTA	820	56.16799	2
GCCATAC	4560	55.39052	11
CGGCCAT	4590	55.181313	9
CCATACC	4745	53.158504	12
CATACCA	4770	52.807854	13
GGCCATA	4845	52.344303	10
CCTGGTT	6995	52.034355	70
CCGAACT	1045	51.019226	67
CGTCTAC	1025	50.963943	3
GCGCGGT	4975	48.907715	9
GGTCTAC	4160	48.65923	3
CGGTCTA	530	48.63885	2
TACCACC	5260	47.301823	15
TGGCGCG	5125	47.139668	15