EGAF00005319051 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319051
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3664554
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	20558	0.5609959629466506	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	9395	0.256374991335917	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	8681	0.23689103776339493	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6535	0.17833002324430203	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5741	0.1566629936412453	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5352	0.1460477864427704	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	5135	0.14012619270994506	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	4114	0.11226468487024616	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	4087	0.1115278967099407	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	4280	63.59377	4
TCTACGG	4335	62.867924	5
TACGGCC	4475	60.832623	7
CTACGGC	4490	60.623596	6
ACGGCCA	4800	56.85696	8
GCCATAC	4930	55.218254	11
GGGTCTA	3615	55.04618	2
CCTGGTT	7235	53.88569	70
CGGCCAT	5050	53.77001	9
CATACCA	5135	52.944717	13
GGCCATA	5160	52.8902	10
CCATACC	5245	51.96611	12
GCGCGGT	4955	50.70819	9
GCGTCTA	965	50.21676	2
GGTCTAC	4490	48.7558	3
TACCACC	5575	48.697815	15
CTGAACG	5665	48.064312	22
TGGCGCG	5260	47.955402	15
GAACGCG	5655	47.750668	24
TGAACGC	5690	47.624184	23