EGAF00005319052 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319052
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3631690
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	14767	0.4066151020599225	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	7170	0.19742874529489027	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	6734	0.1854233153160099	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	6695	0.18434943511147703	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	5163	0.14216521784623687	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4133	0.11380376629062502	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	4034	0.11107776269450312	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3982	0.10964592242179261	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2215	45.909477	70
AGGACCG	1465	42.688763	70
ATGGCCG	2265	34.933937	69
GCGGCAC	4880	34.719128	33
CGCGGCA	4920	34.21273	32
CCCGTCG	4820	33.13616	44
CCGTCGC	4895	32.507164	45
CGGCACC	5230	32.347057	34
TCGCCGG	4950	32.1619	48
GTCCGTT	240	31.514528	2
TAGTCCG	310	31.052437	6
GTGCCGT	590	30.946442	1
GTTCCGT	375	30.315834	1
GCACCCC	5800	29.674555	36
CCCCCGA	5905	29.248714	19
CACCCCC	6025	28.179695	37
AACGGCG	1655	27.86989	49
GTATGGC	2635	27.71497	67
TATGGCC	2780	26.872793	68
CGGAACG	1705	26.775574	46