EGAF00005319054 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319054
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3605860
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	12845	0.35622569927839687	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10092	0.2798777545439923	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	9652	0.26767539505138854	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8095	0.22449568202869774	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5751	0.15949038509537253	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5731	0.15893573239116326	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5065	0.14046579734099493	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4479	0.12421447310766365	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4344	0.12047056735425114	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4061	0.11262223158969012	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4053	0.11240037050800641	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	3992	0.11070867976016817	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3856	0.10693704137154521	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3822	0.10599413177438946	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2640	0.0	50.74323	70
ATGGCCG	2910	0.0	35.65733	69
GTTCCGT	370	0.0	34.58222	1
CGCGGCA	3700	0.0	34.029957	32
AGGACCG	665	0.0	33.3162	70
TGCGACG	105	6.2755134E-10	32.93545	1
GCGGCAC	3935	0.0	31.745455	33
GTGCCGT	470	0.0	31.639053	1
CGGCACC	4045	0.0	30.974619	34
CCGTCGC	3965	0.0	29.75027	45
CCCGTCG	4040	0.0	29.609535	44
TCGCCGG	4010	0.0	29.559933	48
GTCCGTT	330	0.0	29.243526	2
TATGGCC	3465	0.0	28.041096	68
GCACCCC	4610	0.0	27.719767	36
GTATGGC	3470	0.0	27.532665	67
CGCCCTA	1035	0.0	27.316437	61
CCCCCGA	4645	0.0	27.091402	19
TACGGGT	1520	0.0	26.753952	6
CTTACCC	1920	0.0	26.567009	70