EGAF00005319055 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319055
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3605860
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	27960	0.7754044804845446	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15234	0.42247896479619285	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	13366	0.37067440222304804	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11623	0.3223364190512111	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8101	0.2246620778399605	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7608	0.21098988868120225	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5381	0.14922931006750123	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5710	0.0	64.02195	4
TCTACGG	5740	0.0	63.507263	5
TACGGCC	5815	0.0	62.39018	7
CTACGGC	5930	0.0	61.41436	6
ACGGCCA	6215	0.0	58.541027	8
CCTGGTT	9170	0.0	58.293034	70
GGGTCTA	4735	0.0	58.08677	2
GCCATAC	6355	0.0	56.933987	11
CGGCCAT	6380	0.0	56.813396	9
TCGCGTA	25	2.2971926E-4	56.458908	60
GCGTCTA	965	0.0	55.36033	2
GCCGGTT	1205	0.0	54.620567	3
GGCCATA	6690	0.0	54.23379	10
CCATACC	6725	0.0	53.8528	12
CATACCA	6730	0.0	53.761585	13
GCGCGGT	6150	0.0	53.503708	9
CCGAACT	1310	0.0	52.73853	67
CGGTCTA	700	0.0	52.68416	2
TACCACC	6965	0.0	52.195034	15
CGTCTAC	1240	0.0	51.967262	3