EGAF00005319057 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319057
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3600213
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	28019	0.7782595085346339	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15487	0.43016899277903836	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14203	0.39450443626529874	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12061	0.3350079564736864	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8029	0.22301458274829852	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7766	0.2157094594125403	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5497	0.1526854105576531	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5390	63.32011	4
TCTACGG	5390	63.12823	5
TACGGCC	5465	62.32496	7
CTACGGC	5530	61.59239	6
ACGGCCA	5805	58.91213	8
GGGTCTA	4200	57.463528	2
CCTGGTT	8610	57.2024	70
CGGCCAT	6020	56.750854	9
GCCATAC	6090	55.92173	11
GCGTCTA	1025	55.83773	2
CCATACC	6210	54.896618	12
CGGTCTA	780	54.369343	2
CATACCA	6285	54.186687	13
GGCCATA	6330	53.964836	10
GCCGGTT	1165	53.561646	3
CGTCTAC	1265	52.325333	3
GCGCGGT	6650	52.152073	9
TACCACC	6570	51.734783	15
CCGAACT	1215	50.89887	67
ATACCAC	6765	50.545765	14