EGAF00005319058 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319058
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3699562
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	13733	0.371206104938909	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10354	0.27987096850924514	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	9711	0.2624905326630558	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8509	0.23000020002367846	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	6168	0.16672243903467493	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	5995	0.16204620979456488	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5418	0.1464497689185909	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4553	0.12306862271804068	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4455	0.12041966048953903	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	4152	0.11222950176264108	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4125	0.11149968563846206	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4115	0.11122938337024761	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	4060	0.10974272089506812	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	4004	0.10822902819306718	No Hit
GGTGGTGGGGAAGGACAGGAACATCCTCTCCAGGGCCTCCGCACCATACT	3759	0.10160662262181308	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	3718	0.10049838332213382	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2735	0.0	53.364132	70
ACGATCG	55	1.474582E-7	43.895397	6
ATGGCCG	3030	0.0	37.724346	69
CGCGGCA	4385	0.0	37.235413	32
GCGGCAC	4595	0.0	35.620567	33
AGGACCG	805	0.0	35.111977	70
CGGCACC	4675	0.0	34.947433	34
GTCCGTT	405	0.0	34.068977	2
GTTCCGT	360	0.0	33.578438	1
CGTACTA	145	0.0	33.305363	2
TCGCCGG	4455	0.0	33.1707	48
CCGTCGC	4470	0.0	32.994896	45
CCCGTCG	4540	0.0	32.927013	44
GCACCCC	5275	0.0	31.192516	36
CTTACCC	1880	0.0	30.88937	70
CCCCCGA	5335	0.0	30.591331	19
TATGGCC	3535	0.0	30.112312	68
CACCCCC	5525	0.0	29.792423	37
ACCCGCG	5520	0.0	29.726894	25
GTATGGC	3530	0.0	29.657192	67