EGAF00005319059 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319059
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3699562
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	28174	0.7615496104674013	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15971	0.4316997525653037	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14100	0.3811261981823794	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	12310	0.33274209217199224	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8181	0.2211342856262444	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7755	0.2096194090003087	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5634	0.1522882979120231	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5750	64.70495	4
TACGGCC	5770	64.130775	7
TCTACGG	5825	63.812637	5
CTACGGC	5920	62.61642	6
ACGGCCA	6145	60.21719	8
GGGTCTA	4530	59.29569	2
CCTGGTT	9095	59.10695	70
CGGCCAT	6300	58.461952	9
GCCATAC	6320	58.112465	11
CCATACC	6485	56.68707	12
GGCCATA	6585	56.088825	10
GCGTCTA	1205	55.22734	2
CGGTCTA	775	54.72519	2
CCGAACT	1095	54.49189	67
CATACCA	6775	54.36168	13
GCGCGGT	6955	53.94788	9
GCCGGTT	1125	53.330387	3
TACCACC	6990	52.533783	15
CTGAACG	7130	51.981796	22
CGTCTAC	1380	51.221558	3