EGAF00005319060 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319060
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3659130
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCG	13449	0.367546383976519	No Hit
TGTGGGCCAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCC	10136	0.27700573633623293	No Hit
GGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTTGCCCAGGAGCCTGAAGTTCTC	9564	0.26137360520123637	No Hit
GGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGGGCAAGAAG	8224	0.2247528784164542	No Hit
GGCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCT	6002	0.16402806131512135	No Hit
GGGGTGGGAGAGCGGTCGCGCCGTGGGAGGGGTGGCCCGGCCCCCCCACG	5843	0.1596827661220017	No Hit
GTGGCTTAGGAGCTTGAAGTTGACCGGGTCCACCCGAAGCTTGTGCGCGT	5226	0.14282083446065047	No Hit
GGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACGTT	4481	0.12246080352433503	No Hit
GACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTG	4464	0.12199621221437884	No Hit
GTGCGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCA	4195	0.11464473795683673	No Hit
GTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCACACAGACCAGCACG	4069	0.11120129648304379	No Hit
GCGGGGAGGTGGGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTT	4037	0.11032677166430273	No Hit
GGGGGTACGGGTGCAGGAAGGGGAGGAGGGGCTGGGGGGAGGCCCAAGGG	3986	0.10893299773443416	No Hit
CTGGGGACAGTCCGCCCCGCCCCCCGACCCGCGCGCGGCACCCCCCCCGTCGCCGGGGCGGGGGCGCGGGGAGG	3885	0.10617277877528264	No Hit
TGTCCAGGGAGGCGTGCACCGCAGGGGTGAACTCGGCGGGGAGGTGGGCG	3724	0.10177282578099164	No Hit
GGTGGTGGGGAAGGACAGGAACATCCTCTCCAGGGCCTCCGCACCATACT	3690	0.10084364316107929	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCCGT	2595	51.97473	70
CGCGGCA	4525	37.319588	32
ATGGCCG	2895	36.814293	69
AGGACCG	795	36.629704	70
GCGGCAC	4640	36.109207	33
CGGCACC	4765	35.02483	34
CCGTCGC	4795	32.436832	45
TCGCCGG	4815	32.42401	48
CCCGTCG	4885	31.893734	44
CCCCCGA	5485	30.958197	19
CTTACCC	1775	30.509367	70
GCACCCC	5505	30.462963	36
GTTCCGT	420	30.441694	1
TATGGCC	3450	29.369173	68
GTATGGC	3435	29.316513	67
GGCACCC	5715	29.152897	35
ACCCGCG	5750	29.143967	25
CACCCCC	5755	28.97295	37
GACGTAT	445	28.915691	44
CCCCCGT	5600	27.919998	42