EGAF00005319061 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319061
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3659130
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	27671	0.7562180081057519	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15786	0.43141402464520257	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14082	0.38484557804724073	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11648	0.31832703402174833	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8056	0.2201616231180636	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7678	0.20983129869668474	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5366	0.14664688054264266	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5570	64.14022	4
TACGGCC	5620	63.569576	7
TCTACGG	5625	63.51307	5
CTACGGC	5760	61.904747	6
ACGGCCA	5975	59.734924	8
CGGCCAT	6105	58.349163	9
CCTGGTT	8855	57.90272	70
GCGTCTA	1115	57.52597	2
GGGTCTA	4550	56.994415	2
GCCATAC	6215	56.92803	11
CCATACC	6370	55.651085	12
CATACCA	6445	55.164745	13
GGCCATA	6495	55.164074	10
GCGCGGT	6640	53.959435	9
TACCACC	6805	52.398434	15
CCGAACT	1230	51.94478	67
CTGAACG	6945	51.504868	22
CGTCTAC	1350	51.34382	3
GCCGGTT	1260	51.179607	3
CGCGGTG	7065	50.76228	10