EGAF00005319071 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319071
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3292519
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	29624	0.8997366454073613	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	15552	0.4723435157094006	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	14595	0.4432776242141655	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	14308	0.43456089395383896	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	8600	0.2611981889853939	No Hit
GGGCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	7735	0.23492651067465367	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7390	0.22444821123279776	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5893	0.17898150321987513	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	5799	0.17612654627049987	No Hit
GGGGGGCCCTTCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGCGGCCGC	5377	0.1633096118807515	No Hit
GGCCGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGC	5060	0.15368172514722012	No Hit
GGGGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTCCCACCCCTCCTCCCCGCGCCCCCGCCCCGGCG	4566	0.13867801522178005	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	4023	0.12218608305677202	No Hit
GCGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3514	0.10672679489472953	No Hit
GGGGGGAAGGCCCGGCGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGT	3311	0.10056130275937662	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5880	64.143715	4
TCTACGG	5900	63.984665	5
TACGGCC	5875	63.668713	7
CTACGGC	6020	62.594788	6
ACGGCCA	6065	61.560566	8
GGGTCTA	4545	60.717663	2
GCGTCTA	980	60.115498	2
CGGCCAT	6195	60.102856	9
GCCATAC	6215	59.80042	11
CCTGGTT	8780	58.896942	70
CCATACC	6300	58.830467	12
GGCCATA	6385	58.424026	10
CATACCA	6395	58.064243	13
CGTCTAC	1235	57.18257	3
CGGTCTA	725	56.549057	2
CCGAACT	1190	55.703632	67
TACCACC	6765	55.550438	15
GCGCGGT	7435	55.03592	9
CTGAACG	6960	53.772354	22
ACCACCC	7050	53.500217	16